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Chip type: Axiom_Exome319

The Axiom Genotyping Solution

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> cdf <- AffymetrixCdfFile$byChipType("Axiom_Exome319", tags="r1")
> cdf

Path: annotationData/chipTypes/Axiom_Exome319
Filename: Axiom_Exome319,r1.cdf
File size: 130.05 MB (136363403 bytes)
Chip type: Axiom_Exome319
RAM: 0.00MB
File format: v4 (binary; XDA)
Dimension: 992x992
Number of cells: 984064
Number of units: 404099
Cells per unit: 2.44
Number of QC units: 4

> unitNames <- getUnitNames(cdf)
> seqToHumanReadable(grep("^AFFX-", unitNames))
[1] "1-85116"
> seqToHumanReadable(grep("^AX-", unitNames))
[1] "85117-404099"

NOTE: There are no analysis methods in aroma.affymetrix that supports this chip type. There are several reasons for this, one is that the CEL files the Axiom platform are so called multi-channel CEL, and none of the preprocessing methods are prepared for this.