Chip types
Affymetrix chip types
DNA Copy Number and Genotyping arrays/array plates
- ax13339
- CentHindAv2 & CentXbaAv2
- Citrus_SNP
- Cytogenetics_Array
- CytoScan750K_Array
- CytoscanHD_Array
- DogSty06m520431
- DMET_Plus
- GenomeWideSNP_5
- GenomeWideSNP_6
- Mapping10K_Xba131
- Mapping10K_Xba142
- Mapping50K_Hind240 & Mapping50K_Xba240
- Mapping250K_Nsp & Mapping250K_Sty
- MOUSEDIVm520650
DNA Resequencing arrays
RNA Exon and Gene-level arrays/array plates
- ATH1-121501
- Canine_2
- Citrus
- DroGene-1_0-st-v1
- hGlue2_0
- HG-Focus
- HG_U95A, HG_U95B, HG_U95C, HG_U95D, HG_U95E
- HG_U95Av2
- HG-U219
- HG-U133_Plus_2
- HG-U133A & HG-U133B
- HG-U133A_2
- HTA-2_0
- HT_HG-U133A & HT_HG-U133B
- HT_HG-U133_Plus_PM
- HT_MG-430_PM
- Hu6500 [REQUEST: More information on this chip type is needed]
- Hum6000 [REQUEST: More information on this chip type is needed]
- HuEx-1_0-st-v2 (and HuEx-1_0-st-v1)
- HuGene-1_0-st-v1
- HuGene-1_1-st-v1
- HuGene-2_0-st-v1
- HuGeneFL (a.k.a. Hu6800)
- MoEx-1_0-st-v1
- MoGene-1_0-st-v1
- MoGene-1_1-st-v1
- MoGene-2_0-st-v1
- Mouse430_2
- Mouse430A_2
- PrimeView
- RaEx-1_0-st-v1
- RaGene-1_0-st-v1
- Rat230_2
- X_laevis_2
microRNA Expression arrays
Tiling arrays
- Hs_PromPR_v02
- Mm_PromPR_v02
- Dm_tiling2_MR_v01
- Sc03b_MF_v04 (S. cerevisiae)
Miscellaneous
Axiom Genotyping Solution chip types
Note: None of the Axiom chip types are supported by the Aroma framework. The reason for this is that the Affymetrix Axiom technology is quite different from the classical chip types. For instance, Axiom is a multi-channel technology, whereas all other chip types are using a single-channel technology.