Chip type: Mapping10K_Xba131
Note the difference between Mapping10K_Xba131 (aka 'Mapping 10K Array') and Mapping10K_Xba142 (aka 'Mapping 10K Array 2.0').
The Mapping10K_Xba131 chip interrogates 11,564 SNPs.
Mapping10K_Xba131
> cdf <- AffymetrixCdfFile$byChipType("Mapping10K_Xba131")
> cdf
AffymetrixCdfFile:
Path: annotationData/chipTypes/Mapping10K_Xba131
Filename: Mapping10K_Xba131.cdf
Filesize: 10.79MB
Chip type: Mapping10K_Xba131
RAM: 0.00MB
File format: v4 (binary; XDA)
Dimension: 712x712
Number of cells: 506944
Number of units: 11564
Cells per unit: 43.84
Number of QC units: 9
Resources
By aroma-project.org:
- Mapping10K_Xba131,na26,HB20080916.ufl.gz
Script: scripts/Mapping10K_Xba131,UFL,na26.R - Mapping10K_Xba131,na26,HB20080916.ugp.gz
Script: scripts/Mapping10K_Xba131,UGP,na26.R - Mapping10K_Xba131,HB20080915.acs.gz
By Affymetrix:
- Product page
- Support materials (SNP annotation files with SNP positions, dbSNP ID, fragment lengths etc. Probe sequences.)