Skip to main content

Human Genome U95 Set

"This is a previous generation product [...]. This set of five GeneChip probe arrays contains almost 63,000 probe sets interrogating approximately 54,000 UniGene clusters derived from Build 95 of UniGene. Based on this UniGene build and associated annotations, the HG-U95Av2 array represents approximately 10,000 full-length genes, while arrays B-E represent EST clusters." (Affymetrix Product page as of 2011-05-27)

HG_U95A

Note that the "A" chip was later replaced by the updated HG_U95Av2 chip type.

> cdf <- AffymetrixCdfFile$byChipType("HG_U95A")
> cdf
AffymetrixCdfFile:
Path: annotationData/chipTypes/HG_U95A
Filename: HG_U95A.cdf
Filesize: 29.11MB
Chip type: HG_U95A
RAM: 0.00MB
File format: v3 (text; ASCII)
Dimension: 640x640
Number of cells: 409600
Number of units: 12626
Cells per unit: 32.44
Number of QC units: 13

HG_U95B

> cdf <- AffymetrixCdfFile$byChipType("HG_U95B")
> cdf
AffymetrixCdfFile:
Path: annotationData/chipTypes/HG_U95B
Filename: HG_U95B.CDF
Filesize: 29.16MB
Chip type: HG_U95B
RAM: 0.00MB
File format: v3 (text; ASCII)
Dimension: 640x640
Number of cells: 409600
Number of units: 12620
Cells per unit: 32.46
Number of QC units: 13

HG_U95C

> cdf <- AffymetrixCdfFile$byChipType("HG_U95C")
> cdf
AffymetrixCdfFile:
Path: annotationData/chipTypes/HG_U95C
Filename: HG_U95C.CDF
Filesize: 29.22MB
Chip type: HG_U95C
RAM: 0.00MB
File format: v3 (text; ASCII)
Dimension: 640x640
Number of cells: 409600
Number of units: 12646
Cells per unit: 32.39
Number of QC units: 13

HG_U95D

> cdf <- AffymetrixCdfFile$byChipType("HG_U95D")
> cdf
AffymetrixCdfFile:
Path: annotationData/chipTypes/HG_U95D
Filename: HG_U95D.CDF
Filesize: 29.20MB
Chip type: HG_U95D
RAM: 0.00MB
File format: v3 (text; ASCII)
Dimension: 640x640
Number of cells: 409600
Number of units: 12644
Cells per unit: 32.39
Number of QC units: 13

HG_U95E

> cdf <- AffymetrixCdfFile$byChipType("HG_U95E")
> cdf
AffymetrixCdfFile:
Path: annotationData/chipTypes/HG_U95E
Filename: HG_U95E.CDF
Filesize: 29.20MB
Chip type: HG_U95E
RAM: 0.00MB
File format: v3 (text; ASCII)
Dimension: 640x640
Number of cells: 409600
Number of units: 12639
Cells per unit: 32.41
Number of QC units: 13

Resources

By Affymetrix: